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West Virginia Employer's Guide to Payroll Tax Registration & Compliance

This article breaks down employer responsibilities for payroll taxes and how to register for them in West Virginia.

Lucy Leonard

by Lucy Leonard - March 27th, 2025

Payroll taxes in West Virginia come with specific rules and processes that every employer must follow. Whether you're just starting to hire or already managing a team, understanding the requirements is necessary to stay compliant and avoid penalties. Employers need clear, actionable steps to register for payroll taxes and meet ongoing obligations.

West Virginia has its own set of wage laws, tax registration procedures, and reporting requirements that go beyond federal standards. These regulations ensure fair pay, proper withholding, and accurate reporting for employees. Ignoring or misunderstanding any of these obligations can lead to costly mistakes for your business.

This article breaks down employer responsibilities for payroll taxes and how to register for them in West Virginia. It's designed to help you navigate the process with confidence, so you can focus on running your business smoothly.

Employer Obligations in West Virginia

Employers must follow state and federal wage-and-hour laws to stay compliant. West Virginia's minimum wage is $8.75 per hour, which is higher than the federal minimum. Overtime pay is required for non-exempt employees who work more than 40 hours in a week, calculated at 1.5 times their regular hourly rate. Keeping payroll accurate ensures employees are paid correctly and avoids wage disputes.

Workers' compensation coverage is mandatory for most employers in West Virginia. Businesses with at least one employee must provide insurance through an approved carrier or self-insurance program. Exceptions are rare but may apply to specific types of workers, such as certain agricultural or domestic employees. Failing to secure workers' compensation coverage can result in significant penalties.

All new hires must be reported to the West Virginia New Hire Reporting Center within 14 days of their start date. This requirement helps enforce child support and prevent unemployment fraud. Employers can submit reports online or by mail, but timely reporting is mandatory to avoid compliance issues.

West Virginia Business Registration Requirements

Registering your business correctly is a foundational step for hiring employees and staying compliant in West Virginia. The process requires action with several state agencies, each playing a role in payroll tax compliance and employee protections. Accuracy and timeliness are key to avoiding delays or penalties.

  • Secretary of State: File with this office to officially form or qualify the business entity. This applies to corporations, LLCs, partnerships, and other formal structures operating in West Virginia.

  • West Virginia State Tax Department: Open a withholding tax account to collect and remit state income tax from employee wages through the West Virginia State Tax Department. Every employer must register for this account to process payroll taxes properly.

  • WorkForce West Virginia: Create an account for unemployment insurance. This registration ensures compliance with unemployment tax obligations and allows you to report employee wages.

The One Stop Business Portal simplifies the registration process by offering online filing options. Through the portal, you can register for multiple accounts in one place, making it a convenient choice for employers. Some registrations may require fees, such as the $30 Business Registration fee for sales tax, unless the business qualifies for an exemption.

For those not using the portal, the West Virginia Business Registration Application, Form WV/BUS-APP, is required. This paper form is used to register for necessary tax accounts, including payroll withholding. Be sure to complete and submit it promptly to avoid processing delays or compliance gaps.

Maintain copies of all registration documents, permits, and account numbers for your records. Keeping everything accessible ensures smooth payroll operations and makes future updates or audits easier to manage.

Withholding Tax Accounts and Unemployment Insurance

Setting up withholding tax accounts and registering for unemployment insurance are key steps to managing payroll taxes in West Virginia. These processes ensure compliance with state requirements and keep payroll operations running smoothly.

Withholding Tax

Employers are responsible for withholding state income taxes directly from employee paychecks. This process starts with applying for a state withholding tax account through the West Virginia State Tax Department. The account allows you to remit the taxes withheld from employee wages according to state guidelines.

Employees determine their withholding amounts using the West Virginia IT-104 form, which specifies their filing status and allowances. Employers must keep a completed IT-104 form on file for each employee and make updates when any changes are reported. When withholding taxes, accuracy is non-negotiable to ensure proper deductions and timely payments to the state.

The State Tax Department provides a schedule for depositing withheld taxes, based on your business's payroll frequency and total tax liability. Missing deadlines for remittance can result in penalties, so it's important to follow the schedule closely.

Unemployment Insurance (UI)

Employers must also register with WorkForce West Virginia to establish an unemployment insurance account. This registration is required for reporting wages and paying state unemployment taxes, which fund benefits for eligible workers who lose their jobs.

New employers typically start with a SUTA rate of 2.7%. For businesses with an established history, the rate may be adjusted annually based on unemployment claims and other factors.

Quarterly wage and contribution reports must be submitted to WorkForce West Virginia, detailing wages paid and UI taxes owed. Filing these reports on time avoids penalties and ensures compliance. Employers should maintain organized payroll records, including wages and hours worked, to simplify reporting and prepare for potential audits.

Steps to Calculate and Process Payroll

Payroll in West Virginia demands precision and consistency. Getting each step right ensures employees are paid accurately and keeps your business compliant with state and federal regulations. Follow these steps to streamline the process and avoid missteps.

Confirm Employee Classification

Classify each worker as either an employee or an independent contractor. This distinction determines tax obligations, benefits eligibility, and legal requirements. Misclassifying workers can result in fines and back taxes.

  • Employees: Subject to income tax withholding, FICA contributions, and eligible for overtime and benefits.

  • Independent Contractors: Paid in full with no withholdings. Contractors file and pay their own taxes.

Review classification guidelines carefully when hiring. Missteps here can create compliance risks down the road.

Collect New Hire Documentation

Before running payroll, gather all required documents for every employee. Missing paperwork can delay payroll processing or cause compliance issues.

  • Form I-9: Verifies employment eligibility.

  • Form W-4: Determines federal income tax withholding.

  • West Virginia IT-104: Sets state withholding allowances.

  • Direct Deposit Authorization: Allows electronic payment directly to the employee's bank.

Keep these documents organized and secure. Accurate record-keeping is vital for audits and updates.

Determine Payroll Frequency

Choose a payroll schedule that aligns with West Virginia's requirement to pay employees at least twice a month, with no more than 19 days between pay periods.

Common payroll frequencies include:

  1. Biweekly: Every two weeks, resulting in 26 pay periods annually.

  2. Semi-Monthly: Twice a month, typically on the 15th and last day.

  3. Weekly: Once a week, often used in industries like construction or hospitality.

Stick to your chosen schedule to maintain consistency and meet state requirements. Communicate the frequency clearly to employees during onboarding.

Track Work Hours and Wages

Accurate time tracking is the foundation of payroll. Errors in recorded hours can lead to underpayment, overpayment, or compliance issues.

  • Use a time-tracking system to monitor hours for hourly employees.

  • Include overtime, tips, commissions, and paid leave in wage calculations.

  • Regularly audit time entries to catch mistakes and maintain accuracy.

Train employees and managers on proper time entry practices. Consistency helps prevent payroll discrepancies and disputes.

Calculate Deductions and Taxes

Payroll deductions must include all federal, state, and local tax obligations, along with any additional contributions.

  • Federal Deductions: Include income tax, Social Security, and Medicare (FICA).

  • State Withholding: Calculate based on the IT-104 form completed by the employee.

  • Unemployment Insurance: Pay the employer's share of State Unemployment Tax (SUTA).

  • Local Taxes: Withhold any applicable local taxes if required by the municipality.

Double-check calculations to ensure accuracy. Mistakes in withholdings can lead to penalties or tax discrepancies at year-end.

Distribute Paychecks or Direct Deposits

Issue payments promptly once deductions are complete. Direct deposit is the most common method for distributing wages, but ensure employees have the option to receive paper checks if preferred.

For terminated employees, comply with West Virginia's requirement to issue final wages by the next scheduled payday. Include all earned wages, unused vacation time, or other owed compensation.

Provide pay stubs that detail gross pay, deductions, and net earnings. Employees should be able to access this information securely, whether online or via printed statements.

Key Payroll Tax Deadlines and Filing Methods

Payroll tax deadlines in West Virginia are structured around quarterly and annual schedules. Employers are required to complete specific filings to report tax withholdings and unemployment contributions accurately. Meeting these deadlines ensures compliance and helps avoid penalties or interest charges.

Quarterly Filings

Quarterly filings are a recurring responsibility that require timely and accurate reporting of state and federal payroll taxes.

  • State Withholding Returns: Employers must submit the WV/IT-101Q form to report West Virginia state income tax withholdings. This filing must include precise amounts withheld from employee wages during the quarter.

  • Unemployment Contributions: Wage and contribution reports are due to WorkForce West Virginia each quarter. Employers must provide detailed wage information for every employee on payroll.

  • Federal Form 941: Employers use this federal form to report income tax withholdings, Social Security, and Medicare contributions. The form must reflect totals that align with payroll records for the quarter.

Filing deadlines typically fall on the last day of the month following the end of each quarter (e.g., April 30 for Q1). Late submissions or errors can result in penalties, so it's important to adhere to these schedules without exception.

Annual Filings

Annual filings summarize the year's payroll activity for employees, state agencies, and federal authorities. These filings must be completed with accuracy and submitted on time to close out the calendar year.

  • Employee W-2 Forms: Employers must provide W-2 forms to all employees by January 31. These forms detail total earnings, tax withholdings, and any other deductions from the year.

  • State W-2 Reporting and Reconciliation: Copies of W-2 forms, along with the WV/IT-103 reconciliation form, must be submitted to the West Virginia State Tax Department by late February. Employers should ensure that the totals reported match the information provided in quarterly filings.

  • Federal FUTA Filing: Form 940 is required to report Federal Unemployment Tax liabilities for the year. This form calculates unemployment-related taxes owed to the IRS based on wages paid.

Organized payroll records make annual filings more manageable and help avoid discrepancies during reconciliation.

Filing Methods

West Virginia and federal agencies provide straightforward options for submitting payroll tax forms and payments. Online systems are designed for faster processing and improved accuracy.

  • MyTaxes Portal: Employers can submit state forms, including WV/IT-101Q and WV/IT-103, through the MyTaxes Portal. The portal also supports electronic filing of W-2 copies and provides a centralized location for managing state tax accounts.

  • EFTPS: The Electronic Federal Tax Payment System is available for submitting federal taxes, including income withholdings, FICA contributions, and FUTA payments. Employers can schedule payments and track submission history for added convenience.

Registering for these systems early simplifies the process and reduces the risk of missed deadlines or mailing delays. Online submissions also provide immediate confirmation of receipt, offering peace of mind for employers managing payroll compliance.

Frequently Asked Questions

Navigating payroll taxes and how to register for them in West Virginia can feel complicated without clear guidance. These answers break down the process step by step, making it easier to meet your obligations and avoid mistakes.

How do I get a WV tax ID number?

To register for payroll taxes in West Virginia, you need a tax ID number from the State Tax Department. This number is required to set up withholding accounts and file payroll tax returns.

You can register online through the One Stop Business Portal, which offers a streamlined process and quick confirmation. Alternatively, you can complete and submit Form WV/BUS-APP if you prefer a paper application. Both methods require accurate information about your business, including its legal structure and contact details. Once your registration is processed, the tax ID will be provided for use in payroll filings.

What is the payroll tax in West Virginia?

Payroll tax in West Virginia includes three primary components:

  • State Income Tax Withholding: Employers deduct state income tax from employee wages based on withholding allowances provided on the IT-104 form.

  • State Unemployment Tax (SUTA): Employers pay unemployment tax to support the state's unemployment insurance program. New employers generally start with a 2.7% rate, though this may adjust annually.

  • Federal Taxes: Employers must also withhold federal income tax, Social Security, and Medicare contributions from employee wages according to the IRS.

The exact amount withheld depends on employee earnings, filing status, and the employer's unemployment tax rate.

Do I have to register my business in WV?

If you plan to hire employees or conduct business in West Virginia, registration is required. Employers must register with the State Tax Department for payroll tax accounts and with WorkForce West Virginia for unemployment insurance. If you're forming an LLC or corporation, you'll also need to file with the Secretary of State.

Skipping registration can lead to penalties, delayed payroll, and compliance issues. Completing all required registrations before hiring employees ensures you can legally process payroll and remit taxes.

How much does it cost to register for sales tax in West Virginia?

The registration fee for sales tax in West Virginia is $30 for most businesses. This fee applies to entities selling taxable goods or services. Nonprofits and certain organizations may qualify for an exemption, which can be verified during the registration process.

You can complete sales tax registration online through the One Stop Business Portal or by filing Form WV/BUS-APP. Processing fees are straightforward, and paying promptly ensures no delays in setting up your account.

Managing payroll taxes in West Virginia requires careful attention to detail and a commitment to staying compliant. While the process can feel overwhelming, taking it step by step and using the right tools can make a significant difference. If you're looking for a simpler way to handle payroll and avoid compliance pitfalls, book a demo with us today and discover how our platform can streamline your HR processes.